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16s ripseq single database  (Pathogenomix Inc)

 
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    Pathogenomix Inc 16s ripseq single database
    16s Ripseq Single Database, supplied by Pathogenomix Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/ripseq+16s+database/16s+ripseq+database/pmc12044244-24-9-13
    Average 90 stars, based on 1 article reviews
    16s ripseq single database - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    other:

    Article Title: Tropheryma whipplei Infections, Mexico, 2019–2021
    Article Snippet: A 321-bp contig was assembled and fed into the 16S RipSeq Single database (Pathogenomix, https://www.pathogenomix.com ) and matched to T. whipplei (GenBank accession no. AF190688).

    Article Title: Tropheryma whipplei Infections, Mexico, 2019-2021.
    Article Snippet: A 321-bp contig was assembled and fed into the 16S RipSeq Single database (Pathogenomix, https://www.pathogenomix.com) and matched to T. whipplei (GenBank accession no. AF190688).

    Bacteria:

    Article Title: Utility of Histologic and Histochemical Screening for 16S Ribosomal RNA Gene Sequencing of Formalin-Fixed, Paraffin-Embedded Tissue for Bacterial Endocarditis.
    Article Snippet: ABI trace files were then analyzed with CodonCode Aligner (CodonCode Corporation), with forward and reverse reads trimmed to meet quality criteria and assembled into a single contig. .. Contigs were fed into the 16S RipSeq Single database (Pathogenomix) or nucleotide blast with 16S rRNA sequences (Bacteria and Archaea) database for identification to genus or species level per guidelines established by the Clinical and Laboratory Standards Institute.21 Microbial DNA from organisms recurrently identified in histology laboratory reagents, including Geobacillus spp, Meiothermus silvanus, Acinetobacter radioresistens, and Sphingomonas sp, was classified as contamination rather than pathogenic and excluded from further analysis. ..

    Amplification:

    Article Title: Genomics of Corynebacterium striatum, an emerging multi-drug resistant pathogen of immunocompromised patients
    Article Snippet: .. Briefly, the full 16S rRNA gene was amplified, sequenced and analyzed using the Pathogenomix 16S RipSeq database (Pathogenomix.com, Santa Cruz, CA) for identification, with species-level calls made by ≥99% identity and 0.8% difference from the next species. ..

    Article Title: Genomics of Corynebacterium striatum, an emerging multidrug-resistant pathogen of immunocompromised patients.
    Article Snippet: .. Briefly, the full 16S rRNA gene was amplified, sequenced and analysed using the Pathogenomix 16S RipSeq database (Pathogenomix. com; Santa Cruz, CA, USA) for identification, with species-level calls made by 99% identity and 0.8% difference from the next species. ..



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